euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

219 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip82 chr1 17229472 17229472 - unknown germline . no 236 .
srip131 chr1 24775171 24775171 + unknown germline . no 236 NIPAL3
srip202 chr1 32004332 32004332 - unknown germline . no 236 .
srip719 chr1 56154796 56154796 - unknown germline . no 236 .
srip1604 chr1 72258955 72258955 . unknown germline . no 236 NEGR1
srip1821 chr1 75192898 75192898 - unknown germline . no 236 CRYZ
srip2540 chr1 98363718 98363718 - unknown germline . no 236 DPYD
srip2804 chr1 101978984 101978984 - unknown germline . no 236 .
srip4134 chr1 149308428 149308428 + unknown germline . no 236 LOC645262
srip5054 chr1 169524865 169524865 + unknown germline . no 236 F5
srip6236 chr1 194934643 194934643 - unknown germline . no 236 .
srip6858 chr1 221827812 221827812 - unknown germline . no 236 .
srip7388 chr1 242311569 242311569 + unknown germline . no 236 PLD5
srip7687 chr10 9525639 9525639 + unknown germline . no 236 .
srip7847 chr10 19211098 19211098 - unknown germline . no 236 .
srip8112 chr10 23842050 23842050 - unknown germline . no 236 .
srip8453 chr10 25707693 25707693 - unknown germline . no 236 GPR158
srip8767 chr10 35899760 35899760 . unknown germline . no 236 .
srip8797 chr10 38881919 38881919 . unknown germline . no 236 .
srip8832 chr10 42654393 42654393 . unknown germline . no 236 .
srip8998 chr10 59508864 59508864 + unknown germline . no 236 .
srip9486 chr10 68178140 68178140 + unknown germline . no 236 CTNNA3
srip9810 chr10 82972200 82972200 . unknown germline . no 236 .
srip10594 chr10 91717640 91717640 - unknown germline . no 236 .
srip11837 chr10 124455225 124455225 + unknown germline . no 236 .
srip13820 chr11 33670130 33670130 + unknown germline . no 236 C11orf41
srip13861 chr11 36558481 36558481 - unknown germline . no 236 .
srip14246 chr11 41831803 41831803 - unknown germline . no 236 .
srip14735 chr11 48360744 48360744 - unknown germline . no 236 .
srip15108 chr11 55022660 55022660 - unknown germline . no 236 .
srip15393 chr11 58171843 58171843 + unknown germline . no 236 .
srip17184 chr11 94684368 94684368 + unknown germline . no 236 .
srip17659 chr11 104556129 104556129 - unknown germline . no 236 .
srip18234 chr11 112084613 112084613 + unknown germline . no 236 BCO2
srip18478 chr11 123241793 123241793 + unknown germline . no 236 .
srip19266 chr11 134305645 134305645 - unknown germline . no 236 .
srip19895 chr12 11219195 11219195 - unknown germline . no 236 PRH1-PRR4
srip20138 chr12 12933687 12933687 - unknown germline . no 236 APOLD1
srip21007 chr12 33325798 33325798 - unknown germline . no 236 .
srip21545 chr12 34348029 34348029 + unknown germline . no 236 .
srip22221 chr12 43256979 43256979 - unknown germline . no 236 .
srip23037 chr12 63716098 63716098 + unknown germline . no 236 .
srip23527 chr12 73734042 73734042 . unknown germline . no 236 .
srip26080 chr12 118186932 118186932 + unknown germline . no 236 KSR2
srip26369 chr12 126802934 126802934 - unknown germline . no 236 .
srip27355 chr13 27488117 27488117 + unknown germline . no 236 .
srip29080 chr13 61462340 61462340 - unknown germline . no 236 .
srip29649 chr13 61734491 61734491 . unknown germline . no 236 .
srip29867 chr13 65549230 65549230 - unknown germline . no 236 .
srip30968 chr13 79259790 79259790 - unknown germline . no 236 .
srip31562 chr13 85871605 85871605 - unknown germline . no 236 .
srip31982 chr13 86340151 86340151 - unknown germline . no 236 .
srip33511 chr13 104296230 104296230 - unknown germline . no 236 .
srip35225 chr14 28301256 28301256 + unknown germline . no 236 .
srip35876 chr14 36674752 36674752 + unknown germline . no 236 .
srip36317 chr14 39875089 39875089 + unknown germline . no 236 FBXO33
srip37343 chr14 59220394 59220394 + unknown germline . no 236 .
srip37412 chr14 60287085 60287085 . unknown germline . no 236 RTN1
srip38136 chr14 71197788 71197788 + unknown germline . no 236 MAP3K9
srip38304 chr14 76195802 76195802 + unknown germline . no 236 TTLL5
srip38627 chr14 86381803 86381803 - unknown germline . no 236 .
srip38785 chr14 87858397 87858397 . unknown germline . no 236 .
srip39343 chr15 28175797 28175797 - unknown germline . no 236 OCA2
srip39867 chr15 45047983 45047983 - unknown germline . no 236 TRIM69
srip40224 chr15 47507335 47507335 - unknown germline . no 236 SEMA6D
srip41036 chr15 55850511 55850511 + unknown germline . no 236 PYGO1
srip41728 chr15 62169645 62169645 - unknown germline . no 236 VPS13C
srip43019 chr15 98622503 98622503 + unknown germline . no 236 .
srip43241 chr15 100931152 100931152 - unknown germline . no 236 .
srip45533 chr16 34173843 34173843 . unknown germline . no 236 .
srip46308 chr16 71028014 71028014 + unknown germline . no 236 HYDIN
srip46407 chr16 76865784 76865784 - unknown germline . no 236 .
srip46544 chr17 6341639 6341639 - unknown germline . no 236 .
srip47210 chr17 28398310 28398310 + unknown germline . no 236 EFCAB5
srip47712 chr17 32813627 32813627 . unknown germline . no 236 .
srip48370 chr17 68357405 68357405 + unknown germline . no 236 .
srip49444 chr18 28732910 28732910 - unknown germline . no 236 DSC1
srip51615 chr18 74515281 74515281 - unknown germline . no 236 LOC100131655
srip51836 chr18 74960069 74960069 - unknown germline . no 236 .
srip51947 chr19 12308312 12308312 - unknown germline . no 236 LOC730651
srip52431 chr19 45444694 45444694 + unknown germline . no 236 .
srip52650 chr2 3944612 3944612 - unknown germline . no 236 .
srip54107 chr2 36381245 36381245 + unknown germline . no 236 .
srip54257 chr2 36570259 36570259 - unknown germline . no 236 .
srip55711 chr2 78992036 78992036 - unknown germline . no 236 .
srip56546 chr2 86324351 86324351 . unknown germline . no 236 POLR1A
srip56597 chr2 92108187 92108187 + unknown germline . no 236 SLC9B1P2;LOC100533687
srip56862 chr2 106163161 106163161 + unknown germline . no 236 .
srip57276 chr2 109815788 109815788 . unknown germline . no 236 SH3RF3
srip57431 chr2 119363762 119363762 + unknown germline . no 236 .
srip57509 chr2 125891265 125891265 + unknown germline . no 236 .
srip57743 chr2 129573979 129573979 + unknown germline . no 236 .
srip57796 chr2 132769079 132769079 - unknown germline . no 236 .
srip58248 chr2 141852915 141852915 - unknown germline . no 236 LRP1B
srip58583 chr2 144010796 144010796 + unknown germline . no 236 ARHGAP15
srip59224 chr2 147020926 147020926 + unknown germline . no 236 .
srip59236 chr2 147787210 147787210 - unknown germline . no 236 .
srip59499 chr2 154867738 154867738 . unknown germline . no 236 GALNT13
srip59624 chr2 156527843 156527843 + unknown germline . no 236 .
srip59704 chr2 167079252 167079252 . unknown germline . no 236 SCN9A
srip59773 chr2 168735521 168735521 - unknown germline . no 236 .
srip59799 chr2 169241680 169241680 . unknown germline . no 236 .
srip60385 chr2 180416213 180416213 . unknown germline . no 236 ZNF385B
srip60530 chr2 181000547 181000547 + unknown germline . no 236 .
srip60677 chr2 184252431 184252431 . unknown germline . no 236 .
srip60786 chr2 191478707 191478707 - unknown germline . no 236 .
srip61233 chr2 201638076 201638076 + unknown germline . no 236 AOX2P
srip61654 chr2 213114168 213114168 + unknown germline . no 236 ERBB4
srip62632 chr2 235519802 235519802 + unknown germline . no 236 .
srip63473 chr20 16479499 16479499 - unknown germline . no 236 KIF16B
srip64039 chr20 25895497 25895497 - unknown germline . no 236 .
srip64060 chr20 25903871 25903871 - unknown germline . no 236 .
srip64522 chr20 30474327 30474327 + unknown germline . no 236 TTLL9
srip64971 chr20 43617182 43617182 . unknown germline . no 236 STK4
srip65425 chr21 11041105 11041105 . unknown germline . no 236 BAGE2
srip65547 chr21 14390190 14390190 - unknown germline . no 236 .
srip65574 chr21 14680008 14680008 - unknown germline . no 236 .
srip65601 chr21 17134455 17134455 + unknown germline . no 236 USP25
srip65867 chr21 19517305 19517305 - unknown germline . no 236 .
srip66057 chr21 20346739 20346739 + unknown germline . no 236 .
srip66553 chr21 25472539 25472539 - unknown germline . no 236 .
srip67501 chr22 22486374 22486374 - unknown germline . no 236 IGL@
srip67857 chr22 22715595 22715595 + unknown germline . no 236 IGL@
srip68751 chr22 44324597 44324597 - unknown germline . no 236 PNPLA3
srip70739 chr3 24987866 24987866 - unknown germline . no 236 .
srip72710 chr3 55788574 55788574 + unknown germline . no 236 ERC2
srip73797 chr3 75101217 75101217 + unknown germline . no 236 .
srip74070 chr3 79339854 79339854 - unknown germline . no 236 ROBO1
srip74442 chr3 80590169 80590169 - unknown germline . no 236 .
srip74717 chr3 81990999 81990999 - unknown germline . no 236 .
srip75848 chr3 88353519 88353519 . unknown germline . no 236 .
srip77232 chr3 123590717 123590717 + unknown germline . no 236 MYLK
srip80230 chr3 175677975 175677975 - unknown germline . no 236 .
srip80856 chr3 181192836 181192836 + unknown germline . no 236 .
srip82414 chr4 10632686 10632686 - unknown germline . no 236 CLNK
srip84715 chr4 47007787 47007787 - unknown germline . no 236 .
srip85949 chr4 60009433 60009433 + unknown germline . no 236 .
srip86158 chr4 65994576 65994576 . unknown germline . no 236 .
srip86175 chr4 66413931 66413931 + unknown germline . no 236 EPHA5
srip88896 chr4 103343749 103343749 + unknown germline . no 236 .
srip89973 chr4 112628969 112628969 + unknown germline . no 236 .
srip90714 chr4 118765257 118765257 + unknown germline . no 236 .
srip92186 chr4 134596422 134596422 + unknown germline . no 236 .
srip92814 chr4 138177329 138177329 + unknown germline . no 236 .
srip94109 chr4 165933641 165933641 . unknown germline . no 236 RPL21P51
srip94367 chr4 167524916 167524916 . unknown germline . no 236 .
srip94636 chr4 174035603 174035603 + unknown germline . no 236 .
srip97743 chr5 33633341 33633341 - unknown germline . no 236 ADAMTS12
srip98056 chr5 33797550 33797550 - unknown germline . no 236 ADAMTS12
srip98584 chr5 46393455 46393455 - unknown germline . no 236 .
srip98654 chr5 49477731 49477731 . unknown germline . no 236 .
srip99056 chr5 55448002 55448002 . unknown germline . no 236 ANKRD55
srip99504 chr5 68263468 68263468 - unknown germline . no 236 .
srip100714 chr5 89450774 89450774 + unknown germline . no 236 .
srip101085 chr5 96866415 96866415 + unknown germline . no 236 .
srip102778 chr5 115449068 115449068 - unknown germline . no 236 COMMD10
srip103351 chr5 125040043 125040043 + unknown germline . no 236 .
srip105258 chr5 155619871 155619871 + unknown germline . no 236 .
srip105737 chr5 160435673 160435673 - unknown germline . no 236 .
srip107519 chr6 13503042 13503042 + unknown germline . no 236 .
srip108005 chr6 32509105 32509105 - unknown germline . no 236 .
srip108171 chr6 39219886 39219886 . unknown germline . no 236 .
srip108712 chr6 46310298 46310298 . unknown germline . no 236 .
srip109128 chr6 57494221 57494221 - unknown germline . no 236 PRIM2
srip110076 chr6 69198737 69198737 - unknown germline . no 236 .
srip111055 chr6 77980645 77980645 - unknown germline . no 236 .
srip112048 chr6 91669514 91669514 - unknown germline . no 236 .
srip112689 chr6 102283763 102283763 - unknown germline . no 236 GRIK2
srip112876 chr6 110102979 110102979 . unknown germline . no 236 FIG4
srip113223 chr6 123647635 123647635 + unknown germline . no 236 TRDN
srip113470 chr6 126623603 126623603 - unknown germline . no 236 .
srip113799 chr6 142450105 142450105 - unknown germline . no 236 .
srip114766 chr6 148195798 148195798 + unknown germline . no 236 .
srip116180 chr7 9107873 9107873 - unknown germline . no 236 .
srip117465 chr7 52789459 52789459 + unknown germline . no 236 .
srip117630 chr7 53652509 53652509 - unknown germline . no 236 .
srip118295 chr7 62492938 62492938 + unknown germline . no 236 .
srip118517 chr7 66591179 66591179 - unknown germline . no 236 TYW1
srip118916 chr7 70438883 70438883 . unknown germline . no 236 .
srip118919 chr7 71465552 71465552 . unknown germline . no 236 CALN1
srip119830 chr7 84901724 84901724 - unknown germline . no 236 .
srip120247 chr7 85044744 85044744 + unknown germline . no 236 .
srip121167 chr7 107410604 107410604 . unknown germline . no 236 SLC26A3
srip121736 chr7 107829256 107829256 + unknown germline . no 236 NRCAM
srip122268 chr7 110484750 110484750 + unknown germline . no 236 IMMP2L
srip122683 chr7 124451324 124451324 - unknown germline . no 236 .
srip123132 chr7 135189211 135189211 . unknown germline . no 236 CNOT4
srip123336 chr7 142818659 142818659 + unknown germline . no 236 .
srip124071 chr8 4452901 4452901 - unknown germline . no 236 CSMD1
srip124374 chr8 5829282 5829282 - unknown germline . no 236 .
srip125431 chr8 24926547 24926547 - unknown germline . no 236 .
srip126893 chr8 67381884 67381884 - unknown germline . no 236 .
srip127437 chr8 72399228 72399228 - unknown germline . no 236 .
srip128283 chr8 87315042 87315042 + unknown germline . no 236 .
srip128417 chr8 90599063 90599063 . unknown germline . no 236 .
srip128428 chr8 91446038 91446038 + unknown germline . no 236 .
srip130127 chr8 131041227 131041227 + unknown germline . no 236 .
srip130340 chr8 134972233 134972233 + unknown germline . no 236 .
srip130477 chr8 143403139 143403139 + unknown germline . no 236 TSNARE1
srip131074 chr9 6290487 6290487 + unknown germline . no 236 .
srip131370 chr9 7741401 7741401 + unknown germline . no 236 .
srip131547 chr9 9236605 9236605 + unknown germline . no 236 PTPRD
srip131740 chr9 19671056 19671056 . unknown germline . no 236 SLC24A2
srip133417 chr9 32463891 32463891 - unknown germline . no 236 DDX58
srip134345 chr9 89891678 89891678 - unknown germline . no 236 .
srip135092 chr9 105073661 105073661 . unknown germline . no 236 .
srip135868 chr9 118083870 118083870 . unknown germline . no 236 DEC1
srip137250 chrX 54917144 54917144 + unknown germline . no 236 .
srip137800 chrX 61868750 61868750 . unknown germline . no 236 .
srip139780 chrX 98264296 98264296 - unknown germline . no 236 .
srip140089 chrX 102363181 102363181 . unknown germline . no 236 .
srip140801 chrX 119892837 119892837 - unknown germline . no 236 .
srip141069 chrX 122664864 122664864 - unknown germline . no 236 .
srip141389 chrX 129525276 129525276 - unknown germline . no 236 .
srip141951 chrX 140515251 140515251 - unknown germline . no 236 .
srip142204 chrY 9919969 9919969 . unknown germline . no 236 .
srip142262 chrY 10019297 10019297 + unknown germline . no 236 .
srip142275 chrY 13490336 13490336 + unknown germline . no 236 .
srip142494 chrY 59002944 59002944 . unknown germline . no 236 .